|
Table
4. Antigens overexpressed in tumors
| Gene |
Normal
tissue expression |
HLAa |
HLA
Frequencyb
(%) |
Peptide |
Position |
Lymphocyte
Stimulation Method |
References |
| adipophilin |
adipocytes,
macrophages |
A2 |
44 |
SVASTITGV |
129-137 |
peptide |
Schmidt, 2004 |
AIM-2
|
ubiquitous
(low level) |
A1 |
26 |
RSDSGQQARY |
intron |
autologous
tumor cells |
Harada, 2001 |
BCLX (L)
 |
ubiquitous
(low level) |
A2 |
44 |
YLNDHLEPWI |
173-182 |
peptide |
Sorensen, 2007 |
BING-4
|
ubiquitous
(low level) |
A2 |
44 |
CQWGRLWQL |
ORF2 |
anti-CD3 |
Rosenberg, 2002 |
| CPSF |
ubiquitous (low level) |
A2 |
44 |
KVHPVIWSL |
250-258 |
autologous tumor cells |
Maeda, 2002 |
| A2 |
44 |
LMLQNALTTM |
1360-1369 |
autologous
tumor cells |
Maeda, 2002 |
cyclin D1
|
ubiquitous
(low level) |
DR4 |
24 |
NPPSMVAAGSVVAAV |
198-212 |
peptide |
Dengjel, 2004 |
DKK1
 |
testis,
prostate,
mesenchymal stem cells |
A2 |
44 |
ALGGHPLLGV |
20-29 |
peptide |
Qian, 2007 |
ENAH (hMena)
 |
breast,
prostate stroma and epithelium of colon-rectum, pancreas,
endometrium |
A2 |
44 |
TMNGSKSPV |
502-510 |
peptide |
Di Modugno, 2004 |
| Ep-CAM
|
epithelial
cells |
A24 |
20 |
RYQLDPKFI |
173-181 |
peptide |
Tajima, 2004 |
| EphA3
|
many |
DR11 |
25 |
DVTFNIICKKCG |
356-367 |
autologous
tumor cells |
Chiari, 2000 |
|
FGF5 |
brain,
kidney |
A3 |
22 |
NTYASPRFKf |
172-176
and
204-207 |
autologous
tumor cells |
Hanada, 2004 |
| G250
/ MN / CAIX |
stomach,
liver, pancreas |
A2 |
44 |
HLSTAFARV |
254-262 |
peptide |
Vissers, 1999
|
|
HER-2
/ neu |
ubiquitous (low level) |
A2 |
44 |
KIFGSLAFL |
369-377 |
autologous
tumor cells |
Fisk, 1995 |
| A2 |
44 |
IISAVVGIL |
654-662 |
peptide |
Brossart, 1998 |
| A2 |
44 |
ALCRWGLLL |
5-13 |
peptide |
Kawashima, 1998 |
| A2 |
44 |
ILHNGAYSL |
435-443 |
peptide |
Kawashima, 1998 |
| A2 |
44 |
RLLQETELV |
689-697 |
peptide |
Rongcun, 1999
|
| A2 |
44 |
VVLGVVFGI |
665-673 |
peptide |
Rongcun, 1999
|
| A2 |
44 |
YMIMVKCWMI |
952-961 |
peptide |
Rongcun, 1999
|
| A2 |
44 |
HLYQGCQVV |
48-56 |
peptide |
Scardino, 2001
|
| A2 |
44 |
YLVPQQGFFC |
1023-1032 |
peptide |
Scardino, 2001
|
| A2 |
44 |
PLQPEQLQV |
391-399 |
peptided |
Scardino, 2002
|
| A2 |
44 |
TLEEITGYL |
402-410 |
peptided |
Scardino, 2002
|
| A2 |
44 |
ALIHHNTHL |
466-474 |
peptided |
Scardino, 2002
|
| A2 |
44 |
PLTSIISAV |
650-658 |
peptided |
Scardino, 2002
|
| A3 |
22 |
VLRENTSPK |
754-762 |
peptide |
Kawashima, 1999
|
|
A24 |
20 |
TYLPTNASL |
63-71 |
peptide |
Okugawa, 2000
|
IL13Ralpha2
|
|
A2 |
44 |
WLPFGFILI |
345-353 |
peptide |
Okano, 2002
|
| Intestinal
carboxyl esterase |
liver,
intestine, kidney |
B7 |
17 |
SPRWWPTCL |
alt.
ORF |
autologous
tumor cells |
Ronsin, 1999 |
| alpha-foetoprotein |
liver |
A2 |
44 |
GVALQTMKQ |
542-550 |
adenovirus-dendritic
cells |
Butterfield, 1999
|
| M-CSF
|
liver,
kidney |
B35 |
20 |
LPAVVGLSPGEQEY |
alt.
ORF |
autologous
tumor cells |
Probst-Kepper, 2001
|
MCSP
 |
endothelial
cells, chondrocytes, smooth muscle cells |
DR11 |
25 |
VGQDVSVLFRVTGALQ |
693-708 |
peptide |
Erfurt, 2007 |
mdm-2
|
ubiquitous
(brain, muscle, lung) |
A2 |
44 |
VLFYLGQY |
53-60 |
tumor
lysate-pulsed APCs |
Asai, 2002
|
MMP-2
|
ubiquitous |
A2 |
44 |
GLPPDVQRVh |
560-568 |
autologous
tumor cells |
Godefroy, 2005
|
| MUC1
|
glandular
epithelia |
A2 |
44 |
STAPPVHNV |
950-958 |
peptide |
Brossart, 1999
|
| A2 |
44 |
LLLLTVLTV |
12-20 |
peptide |
Brossart, 1999
|
| DR3 |
21 |
PGSTAPPAHGVT |
repeated
region |
peptide |
Hiltbold, 1998
|
|
p53 |
ubiquitous (low level) |
A2 |
44 |
LLGRNSFEV |
264-272 |
peptide |
Ropke, 1996 |
| A2 |
44 |
RMPEAAPPV |
65-73 |
peptide |
Barfoed, 2000 |
| B46 |
0.1 |
SQKTYQGSY |
99-107 |
autologous
tumor cells |
Azuma, 2003 |
DP5 |
3 |
PGTRVRAMAIYKQ |
153-165 |
peptide |
Fujita, 1998 |
|
DR14 |
6 |
HLIRVEGNLRVE |
193-204 |
peptide |
Fujita, 1998 |
PBF
|
ovary,
pancreas, spleen, liver |
B55 |
4 |
CTACRWKKACQR |
499-510 |
autologous
tumor cells |
Tsukahara, 2004 |
| PRAME
|
testis, ovary, endometrium, adrenals |
A2 |
44 |
VLDGLDVLL |
100-108 |
peptide |
Kessler, 2001 |
| A2 |
44 |
SLYSFPEPEA |
142-151 |
peptide |
Kessler, 2001 |
| A2 |
44 |
ALYVDSLFFL |
300-309 |
peptide |
Kessler, 2001 |
| A2 |
44 |
SLLQHLIGL |
425-433 |
peptide |
Kessler, 2001 |
| A24 |
20 |
LYVDSLFFLc |
301-309 |
autologous
tumor cells |
Ikeda, 1997 |
| PSMA
|
prostate,
CNS, liver |
A24 |
20 |
NYARTEDFF |
178-186 |
peptide |
Horiguchi, 2002 |
| RAGE-1
|
retina |
A2 |
44 |
LKLSGVVRL |
352-360 |
peptide |
Oehlrich, 2005 |
| A2 |
44 |
PLPPARNGGLg |
32-40 |
peptide |
Oehlrich, 2005 |
| B7 |
17 |
SPSSNRIRNT |
11-20 |
autologous
tumor cells |
Gaugler, 1996
|
RGS5
 |
heart,
skeletal muscle, pericytes |
A2 |
44 |
LAALPHSCL |
5-13 |
peptide |
Boss, 2007 |
| A3 |
22 |
GLASFKSFLK |
74-83 |
peptide |
Boss, 2007 |
RNF43
|
|
A2 |
44 |
ALWPWLLMA(T) |
11-19(20) |
peptide |
Uchida, 2004
|
| A24 |
20 |
NSQPVWLCL |
721-729 |
peptide |
Uchida, 2004
|
| RU2AS
|
testis,
kidney, bladder |
B7 |
17 |
LPRWPPPQL |
antisense |
autologous
tumor cells |
Van Den Eynde, 1999 |
| secernin 1 |
ubiquitous |
A2 |
44 |
KMDAEHPEL |
196-204 |
peptide |
Suda, 2006 |
SOX10
|
ubiquitous (low level) |
A2 |
44 |
AWISKPPGV |
332-340 |
tumor-infiltrating
lymphocytes |
Khong, 2002 |
| A2 |
44 |
SAWISKPPGV |
331-340 |
tumor-infiltrating
lymphocytes |
Khong, 2002 |
STEAP1 |
prostate |
A2 |
44 |
MIAVFLPIV |
292-300 |
peptide |
Rodeberg, 2005 |
| A2
 |
44 |
HQQYFYKIPILVINK |
102-116 |
peptide |
Kobayashi, 2007 |
| survivin
|
ubiquitous |
A2 |
44 |
ELTLGEFLKL |
95-104 |
peptide
/ protein |
Schmitz, 2000
Schmidt, 2003
|
| Telomerase
|
testis,
thymus, bone marrow, lymph nodes |
A2 |
44 |
ILAKFLHWLe |
540-548 |
peptide |
Vonderheide, 1999 |
| A2 |
44 |
RLVDDFLLV |
865-873 |
peptide |
Minev, 2000
|
| DR7 |
25 |
RPGLLGASVLGLDDI |
672-686 |
peptide |
Schroers, 2002
|
| DR11 |
25 |
LTDLQPYMRQFVAHL |
766-780 |
peptide |
Schroers, 2003 |
| WT1 |
testis,
ovary, bone marrow, spleen |
A24 |
20 |
CMTWNQMNL |
235-243 |
peptide |
Ohminami, 2000
|
DP5 |
3 |
LSHLQMHSRKH |
337-347 |
peptide |
Guo, 2005
|
| DR4
 |
24 |
KRYFKLSHLQMHSRKH |
332-347 |
peptide |
Fujiki, 2007 |
aClass II HLA are indicated in blue.
bFrequency in Caucasians, based on (1) Marsh SGE, Parham
P, Barber LD. The HLA Factsbook (Academic Press, 2000) for HLA-A,
B, C, and DR, and (2) Colombani J. HLA, Fonctions immunitaires
et applications médicales (John Libbey Eurotext, 1993)
for HLA-DP and DR.
cThe antigen is recognized by CTLs bearing an NK inhibitory
receptor that prevents lysis of cells expressing certain HLA-C
molecules.
dA variant peptide with a Y in position 1 was used
for T cell stimulation.
ePoorly or not processed (Parkhurst, 2004;
Ayyoub, 2001).
fThe peptide is composed of two non-contiguous fragments
that are spliced.
gAlternative transcript.
hMMP-2 is expressed ubiquitously but melanoma cells
cross-present, in an αvβ3-dependent manner, an antigen
derived from secreted MMP-2.
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