|
Table
1. Tumor antigens resulting from mutations
| Gene/protein |
Tumor |
HLAa |
HLA
Frequencyb
(%) |
Peptidec |
Position |
Lymphocyte
Stimulation Method |
References |
| alpha-actinin-4 |
lung
carcinoma |
A2 |
44 |
FIASNGVKLV |
118-127 |
autologous
tumor cells |
Echchakir, 2001 |
| ARTC1 |
melanoma |
DR1 |
18 |
YSVYFNLPADTIYTNh |
|
autologous
tumor cells |
Wang, 2005 |
| BCR-ABL
fusion protein (b3a2) |
chronic
myeloid leukemia |
A2 |
44 |
SSKALQRPV |
926-934
|
peptide |
Yotnda, 1998a
|
| B8 |
14 |
GFKQSSKAL |
922-930 |
peptide |
Yotnda, 1998a |
| DR4 |
24 |
ATGFKQSSKALQRPVAS |
920-936 |
peptide |
ten Bosch, 1996 |
| DR9 |
3 |
ATGFKQSSKALQRPVAS |
920-936 |
peptide |
Makita, 2002 |
B-RAF
|
melanoma |
DR4 |
24 |
EDLTVKIGDFGLATEKSRWSGSHQFEQLS |
586-614 |
peptide |
Sharkey, 2004 |
CASP-5
|
colorectal,
gastric, and endometrial carcinoma |
A2 |
44 |
FLIIWQNTMg |
67-75 |
peptide |
Schwitalle, 2004 |
| CASP-8
|
head
and neck squamous cell carcinoma |
B35 |
20 |
FPSDSWCYF |
476-484 |
autologous
tumor cells |
Mandruzzato, 1997 |
| beta-catenin
|
melanoma |
A24 |
20 |
SYLDSGIHF |
29-37 |
autologous
tumor cells |
Robbins, 1996 |
| Cdc27
|
melanoma |
DR4 |
24 |
FSWAMDLDPKGAe |
760-771 |
autologous
tumor cells |
Wang, 1999b |
| CDK4
|
melanoma |
A2 |
44 |
ACDPHSGHFV |
23-32 |
autologous
tumor cells |
Wolfel, 1995 |
| CDKN2A
|
melanoma |
A11 |
13 |
AVCPWTWLRg |
125-133
(p14ARF-ORF3)
111-119 (p16INK4a-ORF3) |
autologous
tumor cells |
Huang, 2004 |
| COA-1 |
colorectal
carcinoma |
DR4 |
24 |
TLYQDDTLTLQAAGe |
371-384 |
autologous
tumor cells |
Maccalli, 2003 |
| DR13 |
19 |
TLYQDDTLTLQAAGe |
371-384 |
autologous
tumor cells |
Maccalli, 2003 |
|
dek-can
fusion protein |
myeloid
leukemia |
DR53 |
49 |
TMKQICKKEIRRLHQY |
342-357 |
peptide |
Makita, 2002 |
|
EFTUD2 |
melanoma |
A3 |
22 |
KILDAVVAQK |
668-677 |
autologous
tumor cells |
Lennerz, 2005 |
| Elongation
factor 2 |
lung
squamous CC |
A68 |
8 |
ETVSEQSNV |
581-589 |
autologous
tumor cells |
Hogan, 1998 |
|
ETV6-AML1
fusion protein |
acute
lymphoblastic leukemia |
A2 |
44 |
RIAECILGM |
334-342 |
peptide |
Yotnda, 1998b |
| DP5 |
3 |
IGRIAECILGMNPSR |
332-346 |
peptide |
Yun, 1999
|
| DP17 |
1 |
IGRIAECILGMNPSR |
332-346 |
peptide |
Yun, 1999
|
FLT3-ITD |
acute
myelogenous leukemia |
A1 |
26 |
YVDFREYEYY |
591-600 |
peptide |
Graf, 2007 |
FN1
|
melanoma |
DR2 |
25 |
MIFEKHGFRRTTPP |
2050-2063 |
autologous
tumor cells |
Wang, 2002 |
|
GPNMB |
melanoma |
A3 |
22 |
TLDWLLQTPK |
179-188 |
autologous
tumor cells |
Lennerz, 2005 |
|
LDLR-fucosyltransferaseAS
fusion protein |
melanoma |
DR1 |
18 |
WRRAPAPGA |
315-323 |
autologous
tumor cells |
Wang, 1999a |
| DR1 |
18 |
PVTWRRAPA |
312-320 |
autologous
tumor cells |
Wang, 1999a |
| HLA-A2d
|
renal
cell carcinoma |
|
|
|
|
autologous
tumor cells |
Brandle, 1996 |
| HLA-A11d
|
melanoma |
|
|
|
|
autologous
tumor cells |
Huang, 2004
|
| hsp70-2
|
renal
cell carcinoma |
A2 |
44 |
SLFEGIDIYT |
286-295 |
autologous
tumor cells |
Gaudin, 1999 |
| KIAAO205
|
bladder
tumor |
B44 |
21 |
AEPINIQTW |
262-270 |
autologous
tumor cells |
Gueguen, 1998 |
| MART2
|
melanoma |
A1 |
26 |
FLEGNEVGKTY |
446-455 |
autologous
tumor cells |
Kawakami, 2001 |
ME1
|
non-small
cell lung carcinoma |
A2 |
44 |
FLDEFMEGV |
224-232 |
autologous
tumor cells |
Karanikas, 2001 |
| MUM-1f
|
melanoma |
B44 |
21 |
EEKLIVVLF |
30-38 |
autologous
tumor cells |
Coulie, 1995 |
| MUM-2
|
melanoma |
B44 |
21 |
SELFRSGLDSY |
123-133 |
autologous
tumor cells |
Chiari, 1999 |
| Cw6 |
18 |
FRSGLDSYV |
126-134 |
autologous
tumor cells |
Chiari, 1999 |
| MUM-3
|
melanoma |
A68 |
8 |
EAFIQPITR
|
322-330 |
autologous
tumor cells |
Baurain, 2000 |
| neo-PAP
|
melanoma |
DR7 |
25 |
RVIKNSIRLTLe |
724-734 |
autologous
tumor cells |
Topalian, 2002 |
| Myosin
class I |
melanoma |
A3 |
22 |
KINKNPKYK |
911-919 |
expansion
of TIL with IL-2 |
Zorn, 1999 |
| NFYC |
lung
squamous cell carcinoma |
B52 |
5 |
QQITKTEV |
275-282 |
autologous
tumor cells |
Takenoyama, 2006 |
OGT
|
colorectal
carcinoma |
A2 |
44 |
SLYKFSPFPLg |
28-37 |
peptide |
Ripberger, 2003 |
| OS-9 |
melanoma |
B44 |
21 |
KELEGILLL |
438-446 |
autologous
tumor cells |
Vigneron, 2002 |
p53 |
head
and neck squamous cell carcinoma |
A2 |
44 |
VVPCEPPEV |
217-225 |
peptide |
Ito, 2007 |
| pml-RARalpha
fusion protein |
promyelocytic
leukemia |
DR11 |
25 |
NSNHVASGAGEAAIETQSSSSEEIV |
|
peptide |
Gambacorti, 1993
|
PRDX5
|
melanoma |
A2 |
44 |
LLLDDLLVSI |
163-172 |
peptide |
Sensi, 2005 |
| PTPRK
|
melanoma |
DR10 |
3 |
PYYFAAELPPRNLPEP |
667-682 |
autologous
tumor cells |
Novellino, 2003 |
| K-ras
|
pancreatic
adenocarcinoma |
B35 |
20 |
VVVGAVGVG |
7-15 |
peptide |
Gjertsen, 1997 |
| N-ras |
melanoma |
A1 |
26 |
ILDTAGREEY |
55-64 |
autologous
tumor cells |
Linard, 2002 |
|
RBAF600 |
melanoma |
B7 |
17 |
RPHVPESAF |
329-337 |
autologous
tumor cells |
Lennerz, 2005 |
|
SIRT2 |
melanoma |
A3 |
22 |
KIFSEVTLK |
192-200 |
autologous
tumor cells |
Lennerz, 2005 |
|
SNRPD1 |
melanoma |
B38 |
5 |
SHETVIIEL |
11-19 |
autologous
tumor cells |
Lennerz, 2005 |
SYT-SSX1
or -SSX2
fusion protein |
sarcoma |
B7 |
17 |
QRPYGYDQIM |
402-410 (SYT)
111-112 (SSX2) |
peptide |
Worley, 2001 |
| Triosephosphate
Isomerase |
melanoma |
DR1 |
18 |
GELIGILNAAKVPAD |
23-37 |
autologous
tumor cells |
Pieper, 1999 |
aClass II HLA are indicated in blue.
bFrequency in Caucasians, based on (1) Marsh SGE, Parham
P, Barber LD. The HLA Factsbook (Academic Press, 2000) for HLA-A,
B, C, and DR, and (2) Colombani J. HLA, Fonctions immunitaires
et applications médicales (John Libbey Eurotext, 1993)
for HLA-DP and DR.
cThe residues modified by the mutation are indicated
in red.
dThe mutation affects the HLA gene itself.
eThe mutation is not located in the region encoding
the peptide.
fLink to GenBank.
gFrameshift product.
hThe mutation creates a start codon (ATG) that opens
an alternative ORF encoding the antigenic peptide. This peptide
is recognized by regulatory T cells (Tregs).
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